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PBS Batch Queues

Batch Queue Definition

GSDC TEM computing cluster provides multiple batch queues with different characteristics to users who submit jobs to analyze large-scale Cryo-EM data. A batch queue means a logical set of CPU and GPU computing resources. Users interact with a specific queue to manange their own jobs.

Within each queue, submitted jobs are executed in order (First-come-first-served basis, but sometimes backfilling (smallest and best-fit) way as whether the required resources are available or not). Note that multiple jobs requiring CPU and/or GPU resources can be executed concurrently if there are enough available resources in the queue.

Batch Queues

cpuQ

More detailed information about cpuQ

Category(shared or dedicated) : Shared

QueueName : cpuQ

Assigned Computing Resources

  • tem-cpu[00-13]-al9.sdfarm.kr : Intel® Xeon® CPU E5-2697v3@2.60GHz 28 Cores, 192GB Main Memory

Remarks : Total 380 CPU Cores

gpuQ

More detailed information about qpuQ

Category(shared or dedicated) : Shared

QueueName : gpuQ

Assigned Computing Resources

  • tem-gpu[01-02]-al9.sdfarm.kr : Intel® Xeon® Gold 6226R CPU@2.90GHz 32 Cores, 384GB Memory, NVIDIA A100 40GB * 2EA (Logically A100 20GB * 4EA using MIG)
  • tem-gpu[05-05]-al9.sdfarm.kr : Intel® Xeon® Gold 6334R CPU@3.60GHz 32 Cores, 384GB Memory, NVIDIA V100 32GB * 4EA
  • tem-gpu[06-08]-al9.sdfarm.kr : Intel® Xeon® CPU E5-2690v4@2.60GHz 28 Cores, 384GB Memory, NVIDIA P100 16GB * 2EA
  • tem-gpu[09-10]-al9.sdfarm.kr : Intel® Xeon® CPU E5-2690v4@2.60GHz 28 Cores, 256GB Memory, NVIDIA P40 24GB * 2EA
  • tem-gpu[11-12]-al9.sdfarm.kr : Intel® Xeon® Gold 6334R CPU@3.60GHz 32 Cores, 384GB Memory, NVIDIA A100 80GB * 4EA (Logically A100 40GB * 8EA using MIG)

Remarks : Total 300 CPU cores, 26 NVIDIA GPUs (MIG GPU Instances : 38 GPUs Total)